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WormBase Tree Display for Variation: WBVar00202595

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Name Class

WBVar00202595NamePublic_nameWBVar00202595
Other_namehaw69871
cewivar00046878
Y50D4A.1d.1:c.1419C>A
CE50956:p.Ser187=
CE39852:p.Ser428=
CE50999:p.Ser473=
Y50D4A.1a.1:c.1677C>A
Y50D4A.1b.1:c.1284C>A
Y50D4A.1c.1:c.561C>A
CE27637:p.Ser559=
HGVSgCHROMOSOME_V:g.1219000C>A
Sequence_detailsSMapS_parentSequenceY50D4A
Flanking_sequencescggatgcttctgaagatggagaatcgaaaattctgacagcgaggatctca
Mapping_targetY50D4A
Type_of_mutationSubstitutionCA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (14)
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021735
TranscriptY50D4A.1c.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY50D4A.1c.1:c.561C>A
HGVSpCE50956:p.Ser187=
cDNA_position561
CDS_position561
Protein_position187
Exon_number4/4
Codon_changetcC/tcA
Amino_acid_changeS
Y50D4A.1b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY50D4A.1b.1:c.1284C>A
HGVSpCE39852:p.Ser428=
cDNA_position1284
CDS_position1284
Protein_position428
Exon_number6/6
Codon_changetcC/tcA
Amino_acid_changeS
Y50D4A.1a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY50D4A.1a.1:c.1677C>A
HGVSpCE27637:p.Ser559=
cDNA_position1684
CDS_position1677
Protein_position559
Exon_number10/11
Codon_changetcC/tcA
Amino_acid_changeS
Y50D4A.1d.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY50D4A.1d.1:c.1419C>A
HGVSpCE50999:p.Ser473=
cDNA_position1419
CDS_position1419
Protein_position473
Exon_number7/7
Codon_changetcC/tcA
Amino_acid_changeS
Remark[20081124 db] this Variation was previously named hw69871
MethodWGS_Hawaiian_Waterston