WormBase Tree Display for Gene: WBGene00021735
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| WBGene00021735 | SMap | S_parent | Sequence | Y50D4A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y50D4A.1 | |||||||
| Molecular_name (12) | |||||||||
| Other_name | Y50D4A.g | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y50D4A.h | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y50D4A.i | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y50D4A.1 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y50D4A.1 | ||||||||
| DB_info | Database | AceView | gene | 5B697 | |||||
| WormQTL | gene | WBGene00021735 | |||||||
| WormFlux | gene | WBGene00021735 | |||||||
| NDB | locus_tag | CELE_Y50D4A.1 | |||||||
| NCBI | gene | 178618 | |||||||
| RefSeq | protein | NM_001313331.3 | |||||||
| NM_001047732.4 | |||||||||
| NM_001313332.3 | |||||||||
| NM_001047731.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF320997 | |||||||
| TrEMBL | UniProtAcc | G4S703 | |||||||
| A0A0K3AT22 | |||||||||
| Q95Y57 | |||||||||
| A0A0K3AVC2 | |||||||||
| UniProt_GCRP | UniProtAcc | G4S703 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (213) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP5026 | ||||||||
| Ortholog (36) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplaapapa; ABplpapapa; ABpraapapa; germ line; and sensory neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; hsf-1; and eat-2 based on RNA-seq and microarray studies. Is affected by twelve chemicals including mianserin; Alovudine; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y50D4A.1a | |||||||
| Y50D4A.1b | |||||||||
| Y50D4A.1c | |||||||||
| Y50D4A.1d | |||||||||
| Corresponding_CDS_history | Y50D4A.1:wp154 | ||||||||
| Corresponding_transcript | Y50D4A.1a.1 | ||||||||
| Y50D4A.1b.1 | |||||||||
| Y50D4A.1c.1 | |||||||||
| Y50D4A.1d.1 | |||||||||
| Other_sequence | HS00841 | ||||||||
| JI459158.1 | |||||||||
| CRC06968_1 | |||||||||
| OF01082 | |||||||||
| HG09444 | |||||||||
| SR03709 | |||||||||
| CR03688 | |||||||||
| CJC17640_1 | |||||||||
| FC814646.1 | |||||||||
| JO473875.1 | |||||||||
| Associated_feature | WBsf661123 | ||||||||
| WBsf999278 | |||||||||
| WBsf999279 | |||||||||
| WBsf1019150 | |||||||||
| WBsf231400 | |||||||||
| WBsf231401 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057066 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037322 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015661 | ||||||||
| Expr1039524 | |||||||||
| Expr1160511 | |||||||||
| Expr2007740 | |||||||||
| Expr2025983 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (95) | |||||||||
| Interaction | WBInteraction000576269 | ||||||||
| Map_info | Positive | Positive_clone | Y50D4A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -19.8482 | |||||||
| Method | Gene |
