WormBase Tree Display for Variation: WBVar00200330
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| WBVar00200330 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00200330 | |||
| Other_name | haw67606 | ||||
| haw159378 | |||||
| cewivar00113052 | |||||
| C49C3.4c.1:c.957+238A>T | |||||
| C49C3.4b.1:c.1146+238A>T | |||||
| C49C3.4a.1:c.2898+238A>T | |||||
| HGVSg | CHROMOSOME_IV:g.17325546A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C49C3 | |
| Flanking_sequences | aaattttttatcaaaattttttttt | aatcaaattttttatcggtcaaaat | |||
| Mapping_target | C49C3 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00579243 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00008194 | |||
| Transcript | C49C3.4c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C49C3.4c.1:c.957+238A>T | ||||
| Intron_number | 7/14 | ||||
| C49C3.4b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C49C3.4b.1:c.1146+238A>T | ||||
| Intron_number | 8/15 | ||||
| C49C3.4a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C49C3.4a.1:c.2898+238A>T | ||||
| Intron_number | 15/23 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw67606 | ||||
| Method | WGS_Hawaiian_Waterston |
