WormBase Tree Display for Variation: WBVar00198767
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WBVar00198767 | Name | Public_name | WBVar00198767 | ||
---|---|---|---|---|---|
Other_name | haw66043 | ||||
cewivar00217008 | |||||
F38C2.1a.1:c.22+221A>T | |||||
F38C2.1c.1:c.11-581A>T | |||||
F38C2.1b.1:c.11-581A>T | |||||
HGVSg | CHROMOSOME_IV:g.16249196A>T | ||||
Sequence_details | SMap | S_parent | Sequence | F38C2 | |
Flanking_sequences | gaaagaaattaaacagtagatttta | aaaagtttcctaatcaatataaaaa | |||
Mapping_target | F38C2 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00009535 | |||
Transcript | F38C2.1b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F38C2.1b.1:c.11-581A>T | ||||
Intron_number | 1/3 | ||||
F38C2.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F38C2.1a.1:c.22+221A>T | ||||
Intron_number | 1/2 | ||||
F38C2.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F38C2.1c.1:c.11-581A>T | ||||
Intron_number | 1/2 | ||||
Remark | [20081124 db] this Variation was previously named hw66043 | ||||
Method | WGS_Hawaiian_Waterston |