WormBase Tree Display for Variation: WBVar00198291

WBVar00198291 Evidence: Paper_evidence: WBPaper00004703
  Name: Public_name: WBVar00198291
    Other_name: snp_Y105C5B[27]
      haw65567
      cewivar00216449
      Y105C5B.21a.1:c.372+1090T>C
      Y105C5B.21c.1:c.153+1090T>C
      Y105C5B.21e.1:c.372+1090T>C
      Y105C5B.21f.1:c.153+1090T>C
    HGVSg: CHROMOSOME_IV:g.16016247A>G
  Sequence_details: SMap: S_parent: Sequence: Y105C5B
    Flanking_sequences: ccgggactttaaatatgaatttgag tttaaattatttttcagtgttttca
    Mapping_target: Y105C5B
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (12)
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
      SNP_Wicks
    History: Acquires_merge: WBVar00248269
    Status: Live
  Affects: Gene: WBGene00002175
    Transcript: Y105C5B.21e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105C5B.21e.1:c.372+1090T>C
        Intron_number: 3/14
      Y105C5B.21f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105C5B.21f.1:c.153+1090T>C
        Intron_number: 1/11
      Y105C5B.21c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105C5B.21c.1:c.153+1090T>C
        Intron_number: 1/11
      Y105C5B.21a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y105C5B.21a.1:c.372+1090T>C
        Intron_number: 3/14
  Reference: WBPaper00004703
  Remark: [20081124 db] this Variation was previously named hw65567
  Method: WGS_Hawaiian_Waterston