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WormBase Tree Display for Variation: WBVar00198258

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Name Class

WBVar00198258EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00198258
Other_name (11)
HGVSgCHROMOSOME_IV:g.16006142A>T
Sequence_detailsSMapS_parentSequenceY105C5B
Flanking_sequencesacttgaaacagtaaattttttttttaatgtgtttttttttggatttttct
Mapping_targetY105C5B
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00578016
StatusLive
AffectsGeneWBGene00002175
TranscriptY105C5B.21g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY105C5B.21g.1:c.290-92T>A
Intron_number2/10
Y105C5B.21e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY105C5B.21e.1:c.800-92T>A
Intron_number5/14
Y105C5B.21f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY105C5B.21f.1:c.581-92T>A
Intron_number3/11
Y105C5B.21c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY105C5B.21c.1:c.581-92T>A
Intron_number3/11
Y105C5B.21h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY105C5B.21h.1:c.71-92T>A
Intron_number2/11
Y105C5B.21b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY105C5B.21b.1:c.290-92T>A
Intron_number2/10
Y105C5B.21d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY105C5B.21d.1:c.71-92T>A
Intron_number2/11
Y105C5B.21a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY105C5B.21a.1:c.800-92T>A
Intron_number5/14
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw65534
MethodWGS_Hawaiian_Waterston