WormBase Tree Display for Variation: WBVar00198099
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WBVar00198099 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00198099 | |||
Other_name | haw65375 | ||||
haw158069 | |||||
cewivar00216223 | |||||
Y105C5B.15a.1:c.573+139A>C | |||||
Y105C5B.15b.1:c.414+139A>C | |||||
HGVSg | CHROMOSOME_IV:g.15953567A>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y105C5B | |
Flanking_sequences | acttcactgttttaaataatcgata | atacagtaaacatgttttcaattta | |||
Mapping_target | Y105C5B | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00577934 | |||
Status | Live | ||||
Affects | Gene | WBGene00013654 | |||
Transcript | Y105C5B.15b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y105C5B.15b.1:c.414+139A>C | ||||
Intron_number | 2/3 | ||||
Y105C5B.15a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105C5B.15a.1:c.573+139A>C | ||||
Intron_number | 4/6 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw65375 | ||||
Method | WGS_Hawaiian_Waterston |