WormBase Tree Display for Variation: WBVar00196263
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| WBVar00196263 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00196263 | |||
| Other_name | haw63539 | ||||
| haw157004 | |||||
| cewivar00213951 | |||||
| Y41E3.3d.1:c.479-480T>C | |||||
| Y41E3.3a.1:c.878-480T>C | |||||
| Y41E3.3c.1:c.878-480T>C | |||||
| Y41E3.3b.1:c.479-480T>C | |||||
| HGVSg | CHROMOSOME_IV:g.14993884T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | Y41E3 | |
| Flanking_sequences | aaaatcgacaatttaaggaaaaaat | taccaatttttaaaaattgttaaaa | |||
| Mapping_target | Y41E3 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00576869 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00012763 | |||
| Transcript | Y41E3.3d.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y41E3.3d.1:c.479-480T>C | ||||
| Intron_number | 4/4 | ||||
| Y41E3.3c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y41E3.3c.1:c.878-480T>C | ||||
| Intron_number | 8/10 | ||||
| Y41E3.3b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y41E3.3b.1:c.479-480T>C | ||||
| Intron_number | 4/6 | ||||
| Y41E3.3a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y41E3.3a.1:c.878-480T>C | ||||
| Intron_number | 8/11 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw63539 | ||||
| Method | WGS_Hawaiian_Waterston |
