WormBase Tree Display for Variation: WBVar00195839
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| WBVar00195839 | Name | Public_name | WBVar00195839 | ||
|---|---|---|---|---|---|
| Other_name | haw63115 | ||||
| cewivar00213427 | |||||
| Y57G11C.42c.1:c.685-238A>G | |||||
| Y57G11C.42b.2:c.1120-238A>G | |||||
| Y57G11C.42a.1:c.1447-238A>G | |||||
| Y57G11C.42a.2:c.1447-238A>G | |||||
| Y57G11C.42d.1:c.1012-238A>G | |||||
| Y57G11C.42b.1:c.1120-238A>G | |||||
| HGVSg | CHROMOSOME_IV:g.14742289A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y57G11C | |
| Flanking_sequences | tatttttgttcctggaaatttcaga | attatttagagtttttggaaattct | |||
| Mapping_target | Y57G11C | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00013331 | |||
| Transcript | Y57G11C.42c.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y57G11C.42c.1:c.685-238A>G | ||||
| Intron_number | 6/9 | ||||
| Y57G11C.42a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y57G11C.42a.1:c.1447-238A>G | ||||
| Intron_number | 10/13 | ||||
| Y57G11C.42b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y57G11C.42b.1:c.1120-238A>G | ||||
| Intron_number | 8/11 | ||||
| Y57G11C.42b.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y57G11C.42b.2:c.1120-238A>G | ||||
| Intron_number | 9/12 | ||||
| Y57G11C.42a.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y57G11C.42a.2:c.1447-238A>G | ||||
| Intron_number | 9/12 | ||||
| Y57G11C.42d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y57G11C.42d.1:c.1012-238A>G | ||||
| Intron_number | 6/9 | ||||
| Remark | [20081124 db] this Variation was previously named hw63115 | ||||
| Method | WGS_Hawaiian_Waterston |
