WormBase Tree Display for Variation: WBVar00195248
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| WBVar00195248 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00195248 | |||
| Other_name | haw62524 | ||||
| haw156443 | |||||
| cewivar00212703 | |||||
| Y57G11A.1e.1:c.1003-136A>T | |||||
| Y57G11A.1a.1:c.124-136A>T | |||||
| Y57G11A.1d.1:c.979-136A>T | |||||
| Y57G11A.1b.1:c.979-136A>T | |||||
| Y57G11A.1f.1:c.979-136A>T | |||||
| HGVSg | CHROMOSOME_IV:g.14493726T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y57G11A | |
| Flanking_sequences | aacagagacttgttaactaaaatat | aaaaaaaatcttatttaaaatctgc | |||
| Mapping_target | Y57G11A | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00576308 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00013289 | |||
| Transcript | Y57G11A.1a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y57G11A.1a.1:c.124-136A>T | ||||
| Intron_number | 2/9 | ||||
| Y57G11A.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y57G11A.1f.1:c.979-136A>T | ||||
| Intron_number | 7/13 | ||||
| Y57G11A.1e.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y57G11A.1e.1:c.1003-136A>T | ||||
| Intron_number | 8/14 | ||||
| Y57G11A.1d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y57G11A.1d.1:c.979-136A>T | ||||
| Intron_number | 7/13 | ||||
| Y57G11A.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y57G11A.1b.1:c.979-136A>T | ||||
| Intron_number | 8/14 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw62524 | ||||
| Method | WGS_Hawaiian_Waterston |
