WormBase Tree Display for Variation: WBVar00193184
expand all nodes | collapse all nodes | view schema
WBVar00193184 | Name | Public_name | WBVar00193184 | ||
---|---|---|---|---|---|
Other_name | haw60460 | ||||
cewivar00210148 | |||||
C48D1.5e.1:c.420+2332A>T | |||||
C48D1.5f.1:c.343-2605A>T | |||||
C48D1.5c.1:c.552+2332A>T | |||||
C48D1.5d.1:c.475-2605A>T | |||||
HGVSg | CHROMOSOME_IV:g.13225678A>T | ||||
Sequence_details | SMap | S_parent | Sequence | C48D1 | |
Flanking_sequences | cgaaaaaaaaattttttttttgaaa | tttttttttatctctattttgtagg | |||
Mapping_target | C48D1 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00008178 | |||
Transcript | C48D1.5e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C48D1.5e.1:c.420+2332A>T | ||||
Intron_number | 3/4 | ||||
C48D1.5c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C48D1.5c.1:c.552+2332A>T | ||||
Intron_number | 5/6 | ||||
C48D1.5f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C48D1.5f.1:c.343-2605A>T | ||||
Intron_number | 2/3 | ||||
C48D1.5d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C48D1.5d.1:c.475-2605A>T | ||||
Intron_number | 4/6 | ||||
Remark | [20081124 db] this Variation was previously named hw60460 | ||||
Method | WGS_Hawaiian_Waterston |