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WormBase Tree Display for Variation: WBVar00193184

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Name Class

WBVar00193184NamePublic_nameWBVar00193184
Other_namehaw60460
cewivar00210148
C48D1.5e.1:c.420+2332A>T
C48D1.5f.1:c.343-2605A>T
C48D1.5c.1:c.552+2332A>T
C48D1.5d.1:c.475-2605A>T
HGVSgCHROMOSOME_IV:g.13225678A>T
Sequence_detailsSMapS_parentSequenceC48D1
Flanking_sequencescgaaaaaaaaattttttttttgaaatttttttttatctctattttgtagg
Mapping_targetC48D1
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00008178
TranscriptC48D1.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D1.5e.1:c.420+2332A>T
Intron_number3/4
C48D1.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D1.5c.1:c.552+2332A>T
Intron_number5/6
C48D1.5f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D1.5f.1:c.343-2605A>T
Intron_number2/3
C48D1.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D1.5d.1:c.475-2605A>T
Intron_number4/6
Remark[20081124 db] this Variation was previously named hw60460
MethodWGS_Hawaiian_Waterston