WormBase Tree Display for Gene: WBGene00008178
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| WBGene00008178 | SMap | S_parent | Sequence | CHROMOSOME_IV | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | ||||||||
| Name | Sequence_name | C48D1.5 | ||||||||
| Molecular_name (15) | ||||||||||
| Other_name | CELE_C48D1.5 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | C48D1.5 | |||||||||
| DB_info | Database | AceView | gene | 4N989 | ||||||
| WormQTL | gene | WBGene00008178 | ||||||||
| WormFlux | gene | WBGene00008178 | ||||||||
| NDB | locus_tag | CELE_C48D1.5 | ||||||||
| NCBI | gene | 3564995 | ||||||||
| RefSeq | protein | NR_131632.1 | ||||||||
| NM_001306943.2 | ||||||||||
| NR_131633.1 | ||||||||||
| NR_131631.1 | ||||||||||
| NM_001306944.3 | ||||||||||
| NM_001306945.3 | ||||||||||
| NM_001306942.4 | ||||||||||
| TrEMBL | UniProtAcc | A0A061AIU7 | ||||||||
| A0A061AKK5 | ||||||||||
| A0A061ADP6 | ||||||||||
| A0A061ACF1 | ||||||||||
| UniProt_GCRP | UniProtAcc | A0A061ADP6 | ||||||||
| RNAcentral | URSid | URS000076DF4B | ||||||||
| URS000076ED35 | ||||||||||
| URS000077E50C | ||||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 16 Jul 2012 11:50:10 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| 3 | 16 Jul 2012 11:52:40 | WBPerson4025 | Event | Acquires_merge | WBGene00010441 | |||||
| 4 | 28 May 2014 11:54:47 | WBPerson4025 | Event | Changed_class | Pseudogene | CDS | ||||
| Acquires_merge | WBGene00010441 | |||||||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0001217 | ||||||||
| Allele (154) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| GO_annotation | 00000007 | |||||||||
| Ortholog (14) | ||||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS | C48D1.5c | ||||||||
| C48D1.5d | ||||||||||
| C48D1.5e | ||||||||||
| C48D1.5f | ||||||||||
| Corresponding_CDS_history | C48D1.5:wp166 | |||||||||
| C48D1.5a:wp233 | ||||||||||
| C48D1.5b:wp233 | ||||||||||
| Corresponding_transcript | C48D1.5a | |||||||||
| C48D1.5b | ||||||||||
| C48D1.5g | ||||||||||
| C48D1.5c.1 | ||||||||||
| C48D1.5d.1 | ||||||||||
| C48D1.5e.1 | ||||||||||
| C48D1.5f.1 | ||||||||||
| Corresponding_pseudogene_history | C48D1.5a:wp243 | |||||||||
| C48D1.5b:wp243 | ||||||||||
| Other_sequence | ACC36690_1 | |||||||||
| EX546291.1 | ||||||||||
| CRC02020_1 | ||||||||||
| JI241183.1 | ||||||||||
| Tcol_isotig19046 | ||||||||||
| Associated_feature (12) | ||||||||||
| Experimental_info | RNAi_result | WBRNAi00049567 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00007311 | Inferred_automatically | RNAi_primary | ||||||||
| WBRNAi00053898 | Inferred_automatically | RNAi_primary | ||||||||
| WBRNAi00033790 | Inferred_automatically | RNAi_primary | ||||||||
| WBRNAi00016356 | Inferred_automatically | RNAi_primary | ||||||||
| Expr_pattern | Expr1026782 | |||||||||
| Expr1146724 | ||||||||||
| Expr2001744 | ||||||||||
| Expr2019972 | ||||||||||
| Microarray_results (19) | ||||||||||
| Expression_cluster (83) | ||||||||||
| Map_info | Positive | Positive_clone | C48D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | IV | 8.48015 | ||||||||
| Method | Gene |
