WormBase Tree Display for Variation: WBVar00191813
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| WBVar00191813 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00191813 | |||
| Other_name | haw59089 | ||||
| haw154284 | |||||
| cewivar00208852 | |||||
| CE42593:p.Ser207Phe | |||||
| T07G12.6b.1:c.620C>T | |||||
| CE38977:p.Ser207Phe | |||||
| T07G12.6a.1:c.620C>T | |||||
| HGVSg | CHROMOSOME_IV:g.10547775C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | T07G12 | |
| Flanking_sequences | ggttatgaattattcgacgattcct | caatgactgtaccaccttgaccccc | |||
| Mapping_target | T07G12 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (13) | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00574149 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00011597 | |||
| WBGene00305591 | |||||
| WBGene00305592 | |||||
| Transcript | T07G12.6a.1 | VEP_consequence | missense_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | T07G12.6a.1:c.620C>T | ||||
| HGVSp | CE38977:p.Ser207Phe | ||||
| cDNA_position | 620 | ||||
| CDS_position | 620 | ||||
| Protein_position | 207 | ||||
| Exon_number | 2/9 | ||||
| Codon_change | tCc/tTc | ||||
| Amino_acid_change | S/F | ||||
| T07G12.20 | |||||
| T07G12.21 | |||||
| T07G12.6b.1 | VEP_consequence | missense_variant | |||
| VEP_impact | MODERATE | ||||
| HGVSc | T07G12.6b.1:c.620C>T | ||||
| HGVSp | CE42593:p.Ser207Phe | ||||
| cDNA_position | 622 | ||||
| CDS_position | 620 | ||||
| Protein_position | 207 | ||||
| Exon_number | 3/10 | ||||
| Codon_change | tCc/tTc | ||||
| Amino_acid_change | S/F | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw59089 | ||||
| Method | WGS_Hawaiian_Waterston |
