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WormBase Tree Display for Variation: WBVar00185537

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Name Class

WBVar00185537EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00185537
Other_namehaw52813
haw150063
cewivar00202704
Y38F2AR.12c.1:c.2772+52G>A
Y38F2AR.12a.1:c.3714+52G>A
Y38F2AR.12b.1:c.1491+52G>A
HGVSgCHROMOSOME_IV:g.2399776C>T
Sequence_detailsSMapS_parentSequenceY38F2AR
Flanking_sequencesgtttttcggaaaaaaattgcaaaaatatcgatttttcaagtttccagtaa
Mapping_targetY38F2AR
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00006629From_analysisMillion_mutation_project_reanalysis
WBStrain00006637From_analysisMillion_mutation_project_reanalysis
WBStrain00006640From_analysisMillion_mutation_project_reanalysis
WBStrain00008273From_analysisMillion_mutation_project_reanalysis
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
WBStrain00022899From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00569928
StatusLive
AffectsGeneWBGene00021430
TranscriptY38F2AR.12b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY38F2AR.12b.1:c.1491+52G>A
Intron_number11/12
Y38F2AR.12c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY38F2AR.12c.1:c.2772+52G>A
Intron_number10/10
Y38F2AR.12a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY38F2AR.12a.1:c.3714+52G>A
Intron_number14/15
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw52813
MethodWGS_Hawaiian_Waterston