WormBase Tree Display for Variation: WBVar00185537
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WBVar00185537 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00185537 | |||
Other_name | haw52813 | ||||
haw150063 | |||||
cewivar00202704 | |||||
Y38F2AR.12c.1:c.2772+52G>A | |||||
Y38F2AR.12a.1:c.3714+52G>A | |||||
Y38F2AR.12b.1:c.1491+52G>A | |||||
HGVSg | CHROMOSOME_IV:g.2399776C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y38F2AR | |
Flanking_sequences | gtttttcggaaaaaaattgcaaaaa | tatcgatttttcaagtttccagtaa | |||
Mapping_target | Y38F2AR | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00569928 | |||
Status | Live | ||||
Affects | Gene | WBGene00021430 | |||
Transcript | Y38F2AR.12b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y38F2AR.12b.1:c.1491+52G>A | ||||
Intron_number | 11/12 | ||||
Y38F2AR.12c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y38F2AR.12c.1:c.2772+52G>A | ||||
Intron_number | 10/10 | ||||
Y38F2AR.12a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y38F2AR.12a.1:c.3714+52G>A | ||||
Intron_number | 14/15 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw52813 | ||||
Method | WGS_Hawaiian_Waterston |