WormBase Tree Display for Variation: WBVar00182316
expand all nodes | collapse all nodes | view schema
WBVar00182316 | Name | Public_name | WBVar00182316 | ||
---|---|---|---|---|---|
Other_name | snp_Y37D8A[4] | ||||
haw49592 | |||||
haw147822 | |||||
cewivar00199597 | |||||
Y37D8A.23c.1:c.159-311A>G | |||||
Y37D8A.23b.1:c.384-311A>G | |||||
Y37D8A.23a.1:c.384-311A>G | |||||
HGVSg | CHROMOSOME_III:g.12945688A>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y37D8A | |
Flanking_sequences | ttgtttaattgtgtattgtaatgtg | ttgtatagtgaagaactgacctcat | |||
Mapping_target | Y37D8A | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | SNP_Wicks | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
SNP_Wicks | |||||
History | Acquires_merge | WBVar00567687 | |||
WBVar00246937 | |||||
Status | Live | ||||
Affects | Gene | WBGene00006762 | |||
Transcript | Y37D8A.23c.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y37D8A.23c.1:c.159-311A>G | ||||
Intron_number | 2/5 | ||||
Y37D8A.23b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y37D8A.23b.1:c.384-311A>G | ||||
Intron_number | 4/8 | ||||
Y37D8A.23a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y37D8A.23a.1:c.384-311A>G | ||||
Intron_number | 5/9 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00004703 | |||||
Remark | [20081124 db] this Variation was previously named hw49592 | ||||
Method | WGS_Hawaiian_Waterston |