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WormBase Tree Display for Variation: WBVar00180929

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Name Class

WBVar00180929NamePublic_nameWBVar00180929
Other_namehaw48205
cewivar00198928
Y79H2A.3e.1:c.3142-605A>T
Y79H2A.3d.1:c.3142-605A>T
Y79H2A.3f.1:c.3163-605A>T
Y79H2A.3c.1:c.3142-1182A>T
Y79H2A.3b.1:c.3163-1182A>T
Y79H2A.3g.1:c.1237-605A>T
Y79H2A.3a.1:c.3163-605A>T
HGVSgCHROMOSOME_III:g.12040162T>A
Sequence_detailsSMapS_parentSequenceY79H2A
Flanking_sequencestgaaaatgtgttttttaacagcctaaatggaaaataatccttttccttgc
Mapping_targetY79H2A
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00013580
TranscriptY79H2A.3e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY79H2A.3e.1:c.3142-605A>T
Intron_number16/28
Y79H2A.3g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY79H2A.3g.1:c.1237-605A>T
Intron_number5/16
Y79H2A.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY79H2A.3c.1:c.3142-1182A>T
Intron_number17/17
Y79H2A.3f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY79H2A.3f.1:c.3163-605A>T
Intron_number16/23
Y79H2A.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY79H2A.3d.1:c.3142-605A>T
Intron_number17/29
Y79H2A.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY79H2A.3b.1:c.3163-1182A>T
Intron_number16/16
Y79H2A.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY79H2A.3a.1:c.3163-605A>T
Intron_number17/29
Remark[20081124 db] this Variation was previously named hw48205
MethodWGS_Hawaiian_Waterston