WormBase Tree Display for Variation: WBVar00179831
expand all nodes | collapse all nodes | view schema
WBVar00179831 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00179831 | |||
Other_name | haw47107 | ||||
haw146017 | |||||
cewivar00198230 | |||||
Y47D3B.2a.1:c.44-1662T>C | |||||
Y47D3B.2b.1:c.44-1662T>C | |||||
HGVSg | CHROMOSOME_III:g.11391452A>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y47D3B | |
Flanking_sequences | gtaggatagaaattagaaataggag | tccgaattcccgacaaaagttgtga | |||
Mapping_target | Y47D3B | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
WBStrain00005301 | From_analysis | WGS_Andersen | |||
WBStrain00005311 | From_analysis | WGS_Andersen | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01448767 | |||
WBVar00565882 | |||||
Status | Live | ||||
Affects | Gene | WBGene00003759 | |||
Transcript | Y47D3B.2a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y47D3B.2a.1:c.44-1662T>C | ||||
Intron_number | 2/4 | ||||
Y47D3B.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y47D3B.2b.1:c.44-1662T>C | ||||
Intron_number | 2/4 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw47107 | ||||
Method | WGS_Hawaiian_Waterston |