WormBase Tree Display for Variation: WBVar00179569
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WBVar00179569 | Name | Public_name | WBVar00179569 | ||
---|---|---|---|---|---|
Other_name | haw46845 | ||||
cewivar00197993 | |||||
Y47D3A.17b.3:c.763-237C>T | |||||
Y47D3A.17d.1:c.229-237C>T | |||||
Y47D3A.17c.1:c.1408-237C>T | |||||
Y47D3A.17b.2:c.763-237C>T | |||||
Y47D3A.17b.4:c.763-237C>T | |||||
Y47D3A.17b.1:c.763-237C>T | |||||
Y47D3A.17a.1:c.1180-237C>T | |||||
Y47D3A.17e.1:c.1078-237C>T | |||||
HGVSg | CHROMOSOME_III:g.11260480G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y47D3A | |
Flanking_sequences | aaagaaagcagccgacaccttactg | ataatgtttatggcctatcaatagc | |||
Mapping_target | Y47D3A | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00012930 | |||
Transcript | Y47D3A.17b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y47D3A.17b.1:c.763-237C>T | ||||
Intron_number | 9/16 | ||||
Y47D3A.17b.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y47D3A.17b.2:c.763-237C>T | ||||
Intron_number | 9/16 | ||||
Y47D3A.17c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y47D3A.17c.1:c.1408-237C>T | ||||
Intron_number | 8/14 | ||||
Y47D3A.17b.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y47D3A.17b.3:c.763-237C>T | ||||
Intron_number | 8/15 | ||||
Y47D3A.17a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y47D3A.17a.1:c.1180-237C>T | ||||
Intron_number | 10/17 | ||||
Y47D3A.17d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y47D3A.17d.1:c.229-237C>T | ||||
Intron_number | 1/8 | ||||
Y47D3A.17e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y47D3A.17e.1:c.1078-237C>T | ||||
Intron_number | 9/15 | ||||
Y47D3A.17b.4 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y47D3A.17b.4:c.763-237C>T | ||||
Intron_number | 7/13 | ||||
Remark | [20081124 db] this Variation was previously named hw46845 | ||||
Method | WGS_Hawaiian_Waterston |