WormBase Tree Display for Variation: WBVar00176456
expand all nodes | collapse all nodes | view schema
WBVar00176456 | Name | Public_name | WBVar00176456 | ||
---|---|---|---|---|---|
Other_name | haw29706 | ||||
haw133661 | |||||
cewivar00122279 | |||||
Y17G7B.2e.1:c.710+156C>A | |||||
Y17G7B.2d.1:c.716+156C>A | |||||
Y17G7B.2a.1:c.710+156C>A | |||||
Y17G7B.2b.1:c.716+156C>A | |||||
HGVSg | CHROMOSOME_II:g.11982410C>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y17G7B | |
Flanking_sequences | acctgatacttgacgaattttattc | aaaaatctacggaaaaattaaaaat | |||
Mapping_target | Y17G7B | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (78) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01440336 | |||
WBVar01377628 | |||||
WBVar01245958 | |||||
WBVar00553526 | |||||
Status | Live | ||||
Affects | Gene | WBGene00012458 | |||
Transcript | Y17G7B.2d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.2d.1:c.716+156C>A | ||||
Intron_number | 5/11 | ||||
Y17G7B.2b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.2b.1:c.716+156C>A | ||||
Intron_number | 5/11 | ||||
Y17G7B.2e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.2e.1:c.710+156C>A | ||||
Intron_number | 5/11 | ||||
Y17G7B.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y17G7B.2a.1:c.710+156C>A | ||||
Intron_number | 5/11 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw29706 | ||||
Method | WGS_Hawaiian_Waterston |