WormBase Tree Display for Variation: WBVar00176263
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WBVar00176263 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00176263 | |||
Other_name | haw29513 | ||||
cewivar00122089 | |||||
K12D12.4.1:c.-60T>A | |||||
K12D12.2.1:c.*171T>A | |||||
HGVSg | CHROMOSOME_II:g.11865517A>T | ||||
Sequence_details | SMap | S_parent | Sequence | K12D12 | |
Flanking_sequences | aaaaattgtgcgaaatgattttttt | aaaattttctttttcacgttttagt | |||
Mapping_target | K12D12 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (26) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01377328 | |||
Status | Live | ||||
Affects | Gene | WBGene00003789 | |||
WBGene00010786 | |||||
Transcript | K12D12.4.1 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | K12D12.4.1:c.-60T>A | ||||
cDNA_position | 228 | ||||
Exon_number | 1/11 | ||||
K12D12.2.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | K12D12.2.1:c.*171T>A | ||||
cDNA_position | 5357 | ||||
Exon_number | 18/18 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw29513 | ||||
Method | WGS_Hawaiian_Waterston |