WormBase Tree Display for Variation: WBVar00175343

WBVar00175343 Name: Public_name: WBVar00175343
    Other_name: pas40360
      haw28593
      haw132818
      cewivar00094564
      C09G5.5.1:c.-9T>C
      C09G5.2a.1:c.798-3716A>G
    HGVSg: CHROMOSOME_II:g.10707213T>C
  Sequence_details: SMap: S_parent: Sequence: C09G5
    Flanking_sequences: gcttactgtcaaaccacagcagtcg ttgcgaggatgtcgacaaccttcct
    Mapping_target: C09G5
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (37)
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson6900
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar00228584
        WBVar01376034
        WBVar00552683
        WBVar01244179
        WBVar01311097
    Status: Live
  Affects: Gene: WBGene00007488
      WBGene00000656
    Transcript: C09G5.2a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C09G5.2a.1:c.798-3716A>G
        Intron_number: 6/10
      C09G5.5.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: C09G5.5.1:c.-9T>C
        cDNA_position: 13
        Exon_number: 1/4
  Reference: WBPaper00038208
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw28593
  Method: WGS_Hawaiian_Waterston