WormBase Tree Display for Variation: WBVar00172480

WBVar00172480 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00172480
    Other_name: haw25730
      cewivar00184889
      C29H12.3b.1:c.9+302C>T
      C29H12.3a.2:c.228+302C>T
      C29H12.3a.1:c.228+302C>T
      C29H12.3b.2:c.9+302C>T
    HGVSg: CHROMOSOME_II:g.6106488C>T
  Sequence_details: SMap: S_parent: Sequence: C29H12
    Flanking_sequences: ttttcagcactgcttttattccatt cttttcattctcgacgactattcaa
    Mapping_target: C29H12
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01372339
    Status: Live
  Affects: Gene: WBGene00004346
    Transcript: C29H12.3b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C29H12.3b.2:c.9+302C>T
        Intron_number: 2/5
      C29H12.3a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C29H12.3a.2:c.228+302C>T
        Intron_number: 3/6
      C29H12.3a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C29H12.3a.1:c.228+302C>T
        Intron_number: 4/7
      C29H12.3b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C29H12.3b.1:c.9+302C>T
        Intron_number: 3/6
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw25730
  Method: WGS_Hawaiian_Waterston