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WormBase Tree Display for Variation: WBVar00171824

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Name Class

WBVar00171824EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00171824
Other_namehaw25074
cewivar00184498
T27F7.2c.2:c.123-239A>G
T27F7.2c.1:c.123-239A>G
T27F7.2b.2:c.948-239A>G
T27F7.2a.1:c.978-239A>G
T27F7.2b.1:c.948-239A>G
HGVSgCHROMOSOME_II:g.4985878A>G
Sequence_detailsSMapS_parentSequenceT27F7
Flanking_sequencesttgttttagtttaaccttatttaataaaccaaatgcagccagaatagaaa
Mapping_targetT27F7
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01371496
StatusLive
AffectsGeneWBGene00020867
TranscriptT27F7.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT27F7.2c.1:c.123-239A>G
Intron_number2/5
T27F7.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT27F7.2a.1:c.978-239A>G
Intron_number8/13
T27F7.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT27F7.2b.1:c.948-239A>G
Intron_number8/13
T27F7.2b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT27F7.2b.2:c.948-239A>G
Intron_number7/11
T27F7.2c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT27F7.2c.2:c.123-239A>G
Intron_number1/5
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw25074
MethodWGS_Hawaiian_Waterston