WormBase Tree Display for Variation: WBVar00170527

WBVar00170527 Name: Public_name: WBVar00170527
    Other_name: pas33258
      haw23777
      haw129556
      cewivar00089437
      F53C3.13f.1:c.963-1129G>A
      F53C3.13e.1:c.957-1129G>A
      F53C3.13b.1:c.957-563G>A
    HGVSg: CHROMOSOME_II:g.3921515C>T
  Sequence_details: SMap: S_parent: Sequence: F53C3
    Flanking_sequences: atttacagtagtttttcagataaaa tgcaaattctaccgtactcccaatt
    Mapping_target: F53C3
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (25)
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson6900
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar01369661
        WBVar00221482
        WBVar00549421
    Status: Live
  Affects: Gene: WBGene00018756
    Transcript: F53C3.13e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F53C3.13e.1:c.957-1129G>A
        Intron_number: 5/6
      F53C3.13b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F53C3.13b.1:c.957-563G>A
        Intron_number: 5/6
      F53C3.13f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F53C3.13f.1:c.963-1129G>A
        Intron_number: 5/6
  Reference: WBPaper00038208
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw23777
  Method: WGS_Hawaiian_Waterston