WormBase Tree Display for Variation: WBVar00168984

WBVar00168984 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00168984
    Other_name: haw22234
      cewivar00008953
      F39E9.3.1:c.687C>T
      F39E9.23:n.103G>A
      CE25878:p.Ala229=
    HGVSg: CHROMOSOME_II:g.3288596C>T
  Sequence_details: SMap: S_parent: Sequence: F39E9
    Flanking_sequences: cacttctgaaaactcaaatctctgc tcaaactatcgaaaacatcgagccg
    Mapping_target: F39E9
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (29)
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01235842
        WBVar01367107
        WBVar01301911
    Status: Live
  Affects: Gene: WBGene00005575
      WBGene00198800
    Transcript: F39E9.23 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: F39E9.23:n.103G>A
        cDNA_position: 103
        Exon_number: 1/1
      F39E9.3.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F39E9.3.1:c.687C>T
        HGVSp: CE25878:p.Ala229=
        cDNA_position: 687
        CDS_position: 687
        Protein_position: 229
        Exon_number: 4/6
        Codon_change: gcC/gcT
        Amino_acid_change: A
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw22234
  Method: WGS_Hawaiian_Waterston