WormBase Tree Display for Gene: WBGene00005575
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| WBGene00005575 | Evidence | Person_evidence | WBPerson522 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F39E9 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sri-63 | Person_evidence | WBPerson522 | |||||
| Sequence_name | F39E9.3 | ||||||||
| Molecular_name | F39E9.3 | ||||||||
| F39E9.3.1 | |||||||||
| CE25878 | |||||||||
| Other_name | CELE_F39E9.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | sri-63 | ||||||||
| DB_info | Database | AceView | gene | 2D579 | |||||
| WormQTL | gene | WBGene00005575 | |||||||
| WormFlux | gene | WBGene00005575 | |||||||
| NDB | locus_tag | CELE_F39E9.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00005575|UniProtKB=O17111 | |||||||
| family | PTHR45830 | ||||||||
| NCBI | gene | 191927 | |||||||
| RefSeq | protein | NM_062097.1 | |||||||
| TREEFAM | TREEFAM_ID | TF315276 | |||||||
| TrEMBL | UniProtAcc | O17111 | |||||||
| UniProt_GCRP | UniProtAcc | O17111 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sri | ||||||||
| Allele (150) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029358 | ||||||||
| Ortholog (18) | |||||||||
| Paralog (292) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F39E9.3 | |||||||
| Corresponding_transcript | F39E9.3.1 | ||||||||
| Associated_feature | WBsf987199 | ||||||||
| WBsf1011869 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00046777 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014602 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021038 | ||||||||
| Expr1150653 | |||||||||
| Expr2016563 | |||||||||
| Expr2034758 | |||||||||
| Drives_construct | WBCnstr00034874 | ||||||||
| Construct_product | WBCnstr00034874 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (22) | |||||||||
| SAGE_tag | SAGE:aaaaatgtca | Strand | Antisense | ||||||
| SAGE:tatgttctct | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:taattggagt | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Interaction | WBInteraction000198311 | ||||||||
| WBInteraction000263254 | |||||||||
| Map_info | Map | II | Position | -6.92557 | Error | 0.01941 | |||
| Positive | Positive_clone | F39E9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00033469 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
