WormBase Tree Display for Variation: WBVar00167197

WBVar00167197 Name: Public_name: WBVar00167197
    Other_name: haw20447
      haw126796
      cewivar00181562
      F53G2.12a.1:c.*134-318A>T
      F53G2.7.1:c.90-318A>T
    HGVSg: CHROMOSOME_II:g.2477681T>A
  Sequence_details: SMap: S_parent: Sequence: F53G2
    Flanking_sequences: aattttttttggctaaaaatgccaa tttcgagatttttttctcgacagac
    Mapping_target: F53G2
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          WGS_Yanai
          Million_mutation_project_reanalysis
      WBStrain00023191 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00546661
        WBVar01363998
    Status: Live
  Affects: Gene: WBGene00302998
      WBGene00018769
    Transcript: F53G2.7.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F53G2.7.1:c.90-318A>T
        Intron_number: 4/10
      F53G2.12a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F53G2.12a.1:c.*134-318A>T
        Intron_number: 5/5
  Reference: WBPaper00038208
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw20447
  Method: WGS_Hawaiian_Waterston