WormBase Tree Display for Variation: WBVar00164648
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WBVar00164648 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00164648 | |||
Other_name | haw17898 | ||||
cewivar00176977 | |||||
F56D12.4e.1:c.574+77T>A | |||||
F56D12.4c.1:c.112+77T>A | |||||
F56D12.4b.1:c.574+77T>A | |||||
F56D12.4a.1:c.1996+77T>A | |||||
F56D12.4f.1:c.112+77T>A | |||||
F56D12.4d.1:c.1996+77T>A | |||||
HGVSg | CHROMOSOME_II:g.1339887T>A | ||||
Sequence_details | SMap | S_parent | Sequence | F56D12 | |
Flanking_sequences | agttttaaaaaattgaaaaaaaaaa | tattttttttgaaattttttcccaa | |||
Mapping_target | F56D12 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01360264 | |||
Status | Live | ||||
Affects | Gene | WBGene00002176 | |||
Transcript | F56D12.4e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F56D12.4e.1:c.574+77T>A | ||||
Intron_number | 3/10 | ||||
F56D12.4a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56D12.4a.1:c.1996+77T>A | ||||
Intron_number | 12/20 | ||||
F56D12.4b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56D12.4b.1:c.574+77T>A | ||||
Intron_number | 3/11 | ||||
F56D12.4f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56D12.4f.1:c.112+77T>A | ||||
Intron_number | 1/8 | ||||
F56D12.4d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56D12.4d.1:c.1996+77T>A | ||||
Intron_number | 12/20 | ||||
F56D12.4c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F56D12.4c.1:c.112+77T>A | ||||
Intron_number | 1/8 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw17898 | ||||
Method | WGS_Hawaiian_Waterston |