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WormBase Tree Display for Variation: WBVar00164648

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Name Class

WBVar00164648EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00164648
Other_namehaw17898
cewivar00176977
F56D12.4e.1:c.574+77T>A
F56D12.4c.1:c.112+77T>A
F56D12.4b.1:c.574+77T>A
F56D12.4a.1:c.1996+77T>A
F56D12.4f.1:c.112+77T>A
F56D12.4d.1:c.1996+77T>A
HGVSgCHROMOSOME_II:g.1339887T>A
Sequence_detailsSMapS_parentSequenceF56D12
Flanking_sequencesagttttaaaaaattgaaaaaaaaaatattttttttgaaattttttcccaa
Mapping_targetF56D12
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01360264
StatusLive
AffectsGeneWBGene00002176
TranscriptF56D12.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56D12.4e.1:c.574+77T>A
Intron_number3/10
F56D12.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56D12.4a.1:c.1996+77T>A
Intron_number12/20
F56D12.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56D12.4b.1:c.574+77T>A
Intron_number3/11
F56D12.4f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56D12.4f.1:c.112+77T>A
Intron_number1/8
F56D12.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56D12.4d.1:c.1996+77T>A
Intron_number12/20
F56D12.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56D12.4c.1:c.112+77T>A
Intron_number1/8
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw17898
MethodWGS_Hawaiian_Waterston