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WormBase Tree Display for Variation: WBVar00164541

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Name Class

WBVar00164541NamePublic_nameWBVar00164541
Other_namehaw17791
haw124939
cewivar00176870
CE39154:p.Cys420=
F47F6.3.1:c.1260T>C
HGVSgCHROMOSOME_II:g.1264425A>G
Sequence_detailsSMapS_parentSequenceF47F6
Flanking_sequencestaacccttgcactcaccgggtacctcaataggcgtagacaatactcttat
Mapping_targetF47F6
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01360121
WBVar00544804
StatusLive
AffectsGeneWBGene00018573
TranscriptF47F6.3.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF47F6.3.1:c.1260T>C
HGVSpCE39154:p.Cys420=
cDNA_position1260
CDS_position1260
Protein_position420
Exon_number7/12
Codon_changetgT/tgC
Amino_acid_changeC
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw17791
MethodWGS_Hawaiian_Waterston