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WormBase Tree Display for Variation: WBVar00164471

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Name Class

WBVar00164471EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00164471
Other_namehaw17721
cewivar00079092
F53A10.2a.1:c.*217A>T
F53A10.2b.4:c.*217A>T
F53A10.2b.1:c.*217A>T
F53A10.2b.2:c.*217A>T
HGVSgCHROMOSOME_II:g.1230682A>T
Sequence_detailsSMapS_parentSequenceF47F6
Flanking_sequencestcacatttccagaattaaaaaaaaaataaatatatctgaaaatattttct
Mapping_targetF47F6
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (13)
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01359984
StatusLive
AffectsGeneWBGene00018734
TranscriptF53A10.2b.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScF53A10.2b.1:c.*217A>T
cDNA_position2660
Exon_number13/13
F53A10.2b.4VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScF53A10.2b.4:c.*217A>T
cDNA_position2037
Exon_number9/9
F53A10.2b.2VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScF53A10.2b.2:c.*217A>T
cDNA_position2800
Exon_number11/11
F53A10.2a.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScF53A10.2a.1:c.*217A>T
cDNA_position2453
Exon_number13/13
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw17721
MethodWGS_Hawaiian_Waterston