WormBase Tree Display for Variation: WBVar00164471
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WBVar00164471 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00164471 | |||
Other_name | haw17721 | ||||
cewivar00079092 | |||||
F53A10.2a.1:c.*217A>T | |||||
F53A10.2b.4:c.*217A>T | |||||
F53A10.2b.1:c.*217A>T | |||||
F53A10.2b.2:c.*217A>T | |||||
HGVSg | CHROMOSOME_II:g.1230682A>T | ||||
Sequence_details | SMap | S_parent | Sequence | F47F6 | |
Flanking_sequences | tcacatttccagaattaaaaaaaaa | ataaatatatctgaaaatattttct | |||
Mapping_target | F47F6 | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (13) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01359984 | |||
Status | Live | ||||
Affects | Gene | WBGene00018734 | |||
Transcript | F53A10.2b.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F53A10.2b.1:c.*217A>T | ||||
cDNA_position | 2660 | ||||
Exon_number | 13/13 | ||||
F53A10.2b.4 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F53A10.2b.4:c.*217A>T | ||||
cDNA_position | 2037 | ||||
Exon_number | 9/9 | ||||
F53A10.2b.2 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F53A10.2b.2:c.*217A>T | ||||
cDNA_position | 2800 | ||||
Exon_number | 11/11 | ||||
F53A10.2a.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F53A10.2a.1:c.*217A>T | ||||
cDNA_position | 2453 | ||||
Exon_number | 13/13 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw17721 | ||||
Method | WGS_Hawaiian_Waterston |