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WormBase Tree Display for Variation: WBVar00164446

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Name Class

WBVar00164446EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00164446
Other_namehaw17696
cewivar00176761
F53A10.2b.3:c.-786-4060C>T
F53A10.2a.1:c.313-4060C>T
F53A10.2b.1:c.-786-4060C>T
F53A10.2d.1:c.130-4060C>T
HGVSgCHROMOSOME_II:g.1221708C>T
Sequence_detailsSMapS_parentSequenceF53A10
Flanking_sequencescacccagttcttcgaccatttacccactattttctgaccaattacagatt
Mapping_targetF53A10
Type_of_mutationSubstitutionCT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01359941
StatusLive
AffectsGeneWBGene00018734
TranscriptF53A10.2d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A10.2d.1:c.130-4060C>T
Intron_number2/9
F53A10.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A10.2b.1:c.-786-4060C>T
Intron_number3/12
F53A10.2b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A10.2b.3:c.-786-4060C>T
Intron_number2/11
F53A10.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF53A10.2a.1:c.313-4060C>T
Intron_number4/12
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw17696
MethodWGS_Hawaiian_Waterston