WormBase Tree Display for Variation: WBVar00160306
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| WBVar00160306 | Name | Public_name | WBVar00160306 | ||
|---|---|---|---|---|---|
| Other_name | haw13556 | ||||
| haw121894 | |||||
| cewivar00135348 | |||||
| CE46515:p.Leu7Ter | |||||
| F17B5.3b.1:c.20T>A | |||||
| HGVSg | CHROMOSOME_I:g.13198355A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F17B5 | |
| Flanking_sequences | tgcggaaactgcacagagtgaaagt | aaagtgttagacgtcgcatgtaaga | |||
| Mapping_target | F17B5 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | WGS_De_Bono | |||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01353795 | |||
| WBVar00541759 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00008907 | |||
| Transcript | F17B5.3b.1 | VEP_consequence | stop_gained | ||
| VEP_impact | HIGH | ||||
| HGVSc | F17B5.3b.1:c.20T>A | ||||
| HGVSp | CE46515:p.Leu7Ter | ||||
| cDNA_position | 22 | ||||
| CDS_position | 20 | ||||
| Protein_position | 7 | ||||
| Exon_number | 2/6 | ||||
| Codon_change | tTa/tAa | ||||
| Amino_acid_change | L/* | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw13556 | ||||
| Method | WGS_Hawaiian_Waterston |
