WormBase Tree Display for Variation: WBVar00159799
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WBVar00159799 | Name | Public_name | WBVar00159799 | ||
---|---|---|---|---|---|
Other_name | haw13049 | ||||
haw121526 | |||||
cewivar00173691 | |||||
CE31093:p.Ile154= | |||||
Y18D10A.6b.1:c.462A>T | |||||
Y18D10A.6a.1:c.540A>T | |||||
CE31092:p.Ile180= | |||||
HGVSg | CHROMOSOME_I:g.12830203A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y18D10A | |
Flanking_sequences | tttttcttgttttattgccaccaat | atattcgaaaatgcgtataatctga | |||
Mapping_target | Y18D10A | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (17) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00541391 | |||
WBVar01353091 | |||||
WBVar01427552 | |||||
WBVar01288765 | |||||
Status | Live | ||||
Affects | Gene | WBGene00003735 | |||
Transcript | Y18D10A.6b.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y18D10A.6b.1:c.462A>T | ||||
HGVSp | CE31093:p.Ile154= | ||||
cDNA_position | 537 | ||||
CDS_position | 462 | ||||
Protein_position | 154 | ||||
Exon_number | 4/9 | ||||
Codon_change | atA/atT | ||||
Amino_acid_change | I | ||||
Y18D10A.6a.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | Y18D10A.6a.1:c.540A>T | ||||
HGVSp | CE31092:p.Ile180= | ||||
cDNA_position | 668 | ||||
CDS_position | 540 | ||||
Protein_position | 180 | ||||
Exon_number | 5/10 | ||||
Codon_change | atA/atT | ||||
Amino_acid_change | I | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw13049 | ||||
Method | WGS_Hawaiian_Waterston |