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WormBase Tree Display for Variation: WBVar00156065

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Name Class

WBVar00156065NamePublic_nameWBVar00156065
Other_namehaw9315
haw118758
cewivar00168937
C16C2.3a.1:c.-62+2059A>G
C16C2.2a.1:c.*458T>C
C16C2.2b.1:c.*578T>C
HGVSgCHROMOSOME_I:g.9725875T>C
Sequence_detailsSMapS_parentSequenceC16C2
Flanking_sequencesatttctttctattacccatattatttaatcttttcagaaaatcaattttt
Mapping_targetC16C2
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01347457
WBVar00538623
StatusLive
AffectsGeneWBGene00007620
WBGene00001145
TranscriptC16C2.2b.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScC16C2.2b.1:c.*578T>C
cDNA_position1962
Exon_number12/12
C16C2.2a.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScC16C2.2a.1:c.*458T>C
cDNA_position1963
Exon_number12/12
C16C2.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC16C2.3a.1:c.-62+2059A>G
Intron_number1/14
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw9315
MethodWGS_Hawaiian_Waterston