WormBase Tree Display for Variation: WBVar00156065
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WBVar00156065 | Name | Public_name | WBVar00156065 | ||
---|---|---|---|---|---|
Other_name | haw9315 | ||||
haw118758 | |||||
cewivar00168937 | |||||
C16C2.3a.1:c.-62+2059A>G | |||||
C16C2.2a.1:c.*458T>C | |||||
C16C2.2b.1:c.*578T>C | |||||
HGVSg | CHROMOSOME_I:g.9725875T>C | ||||
Sequence_details | SMap | S_parent | Sequence | C16C2 | |
Flanking_sequences | atttctttctattacccatattatt | taatcttttcagaaaatcaattttt | |||
Mapping_target | C16C2 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01347457 | |||
WBVar00538623 | |||||
Status | Live | ||||
Affects | Gene | WBGene00007620 | |||
WBGene00001145 | |||||
Transcript | C16C2.2b.1 | VEP_consequence | 3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C16C2.2b.1:c.*578T>C | ||||
cDNA_position | 1962 | ||||
Exon_number | 12/12 | ||||
C16C2.2a.1 | VEP_consequence | 3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C16C2.2a.1:c.*458T>C | ||||
cDNA_position | 1963 | ||||
Exon_number | 12/12 | ||||
C16C2.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C16C2.3a.1:c.-62+2059A>G | ||||
Intron_number | 1/14 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw9315 | ||||
Method | WGS_Hawaiian_Waterston |