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WormBase Tree Display for Variation: WBVar00155770

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Name Class

WBVar00155770EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00155770
Other_namehaw9020
haw118551
F16A11.3c.1:c.552+2619T>A
F16A11.3d.1:c.768+2619T>A
F16A11.3b.1:c.552+2619T>A
F16A11.3a.1:c.552+2619T>A
HGVSgCHROMOSOME_I:g.9385386A>T
Sequence_detailsSMapS_parentSequenceF16A11
Flanking_sequencesatttcagacgtaaaaatttcagatttccagcccgaatgggcaaaaatttcagtcatattcttatagtagagaatgtcagctttccgatacaatattttttttttgaatatcgctccacttattctggtcattccctagtaagaat
Mapping_targetF16A11
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
HistoryAcquires_mergeWBVar00538416
StatusLive
AffectsGeneWBGene00008878
TranscriptF16A11.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF16A11.3c.1:c.552+2619T>A
Intron_number4/15
F16A11.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF16A11.3a.1:c.552+2619T>A
Intron_number5/25
F16A11.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF16A11.3b.1:c.552+2619T>A
Intron_number5/24
F16A11.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF16A11.3d.1:c.768+2619T>A
Intron_number6/25
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw9020
MethodWGS_Hawaiian_Waterston