WormBase Tree Display for Variation: WBVar00155632

WBVar00155632 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00155632
    Other_name: haw8882
      cewivar00168421
      F25H5.1c.1:c.147-2869T>C
      F25H5.1i.1:c.834-2869T>C
      F25H5.1h.1:c.744-2869T>C
      F25H5.1f.1:c.423-2869T>C
      F25H5.1b.1:c.311+816T>C
    HGVSg: CHROMOSOME_I:g.9197993A>G
  Sequence_details: SMap: S_parent: Sequence: C45G3
    Flanking_sequences: actctaaattctaaagttaatcctt aaatcttagagttaataacattaca
    Mapping_target: C45G3
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00027652 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01346904
    Status: Live
  Affects: Gene: WBGene00006407
    Transcript: F25H5.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F25H5.1c.1:c.147-2869T>C
        Intron_number: 1/12
      F25H5.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F25H5.1b.1:c.311+816T>C
        Intron_number: 2/13
      F25H5.1i.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F25H5.1i.1:c.834-2869T>C
        Intron_number: 7/18
      F25H5.1h.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F25H5.1h.1:c.744-2869T>C
        Intron_number: 6/17
      F25H5.1f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F25H5.1f.1:c.423-2869T>C
        Intron_number: 4/15
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw8882
  Method: WGS_Hawaiian_Waterston