WormBase Tree Display for Variation: WBVar00153118
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WBVar00153118 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00153118 | |||
Other_name | haw6368 | ||||
cewivar00165544 | |||||
Y119C1B.8e.1:c.2371-428A>T | |||||
Y119C1B.8c.1:c.2365-428A>T | |||||
Y119C1B.8b.1:c.2359-428A>T | |||||
Y119C1B.8g.1:c.2365-419A>T | |||||
Y119C1B.8h.1:c.2371-419A>T | |||||
Y119C1B.8a.1:c.2359-419A>T | |||||
Y119C1B.8f.1:c.2365-419A>T | |||||
Y119C1B.8d.1:c.2365-428A>T | |||||
HGVSg | CHROMOSOME_I:g.4527131T>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y119C1B | |
Flanking_sequences | ttttgaacaaaactgaaatgttttg | ttttttcgttttcttcagtaacaaa | |||
Mapping_target | Y119C1B | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022850 | From_analysis | WGS_De_Bono | |||
Million_mutation_project_reanalysis | |||||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01343776 | |||
WBVar01282254 | |||||
Status | Live | ||||
Affects | Gene | WBGene00022473 | |||
Transcript | Y119C1B.8a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y119C1B.8a.1:c.2359-419A>T | ||||
Intron_number | 11/14 | ||||
Y119C1B.8d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y119C1B.8d.1:c.2365-428A>T | ||||
Intron_number | 12/15 | ||||
Y119C1B.8h.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y119C1B.8h.1:c.2371-419A>T | ||||
Intron_number | 12/15 | ||||
Y119C1B.8g.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y119C1B.8g.1:c.2365-419A>T | ||||
Intron_number | 11/14 | ||||
Y119C1B.8c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y119C1B.8c.1:c.2365-428A>T | ||||
Intron_number | 12/15 | ||||
Y119C1B.8f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y119C1B.8f.1:c.2365-419A>T | ||||
Intron_number | 12/15 | ||||
Y119C1B.8b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y119C1B.8b.1:c.2359-428A>T | ||||
Intron_number | 12/15 | ||||
Y119C1B.8e.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y119C1B.8e.1:c.2371-428A>T | ||||
Intron_number | 12/15 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw6368 | ||||
Method | WGS_Hawaiian_Waterston |