WormBase Tree Display for Variation: WBVar00151994

WBVar00151994 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00151994
    Other_name: haw5244
      cewivar00164530
      Y54E10A.16.1:c.528G>A
      Y54E10A.2.1:c.1565+2892C>T
      CE24445:p.Arg176=
    HGVSg: CHROMOSOME_I:g.3245376C>T
  Sequence_details: SMap: S_parent: Sequence: Y54E10A
    Flanking_sequences: ctcgacgttttctgcacgatcggca cgccactaaaagaaaatcaaaattt
    Mapping_target: Y54E10A
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00006625 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01342148
    Status: Live
  Affects: Gene: WBGene00021834
      WBGene00003258
    Transcript: Y54E10A.2.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y54E10A.2.1:c.1565+2892C>T
        Intron_number: 9/15
      Y54E10A.16.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: Y54E10A.16.1:c.528G>A
        HGVSp: CE24445:p.Arg176=
        cDNA_position: 540
        CDS_position: 528
        Protein_position: 176
        Exon_number: 5/7
        Codon_change: cgG/cgA
        Amino_acid_change: R
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw5244
  Method: WGS_Hawaiian_Waterston