WormBase Tree Display for Variation: WBVar00145708
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| WBVar00145708 | Name | Public_name | gk301 | ||
|---|---|---|---|---|---|
| HGVSg | CHROMOSOME_X:g.5779762_5780920delinsATCATTGGCACTGTTCTCTTTGACGGAGCTGTCAACAAGATTTTCAGATTCTTCTAAAACTCCAGCTACATCATTTCTCAACTCCTTGGGATCCACACTTGGAATCTTGACGGCTTCAACATTTGTGAGTGA | ||||
| Sequence_details | SMap | S_parent | Sequence | C54H2 | |
| Flanking_sequences | tacacccagtgagctttagttcgagtcaca | acgaaagatgtgtattgctgtctgcgtctc | |||
| Mapping_target | C54H2 | ||||
| Type_of_mutation | Insertion | ATCATTGGCACTGTTCTCTTTGACGGAGCTGTCAACAAGATTTTCAGATTCTTCTAAAACTCCAGCTACATCATTTCTCAACTCCTTGGGATCCACACTTGGAATCTTGACGGCTTCAACATTTGTGAGTGA | |||
| Deletion | |||||
| PCR_product | gk301_external | ||||
| gk301_internal | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00036029 | ||||
| Laboratory | VC | ||||
| Person | WBPerson427 | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00004788 | |||
| Transcript | C54H2.5.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||
| VEP_impact | HIGH | ||||
| Intron_number | 2-4/5 | ||||
| Exon_number | 1-4/6 | ||||
| Isolation | Mutagen | TMP/UV | |||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
| Method | KO_consortium_allele |
