WormBase Tree Display for Variation: WBVar00145400
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| WBVar00145400 | Evidence | Paper_evidence | WBPaper00002916 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | ga12 | |||||
| Other_name | CE05002:p.Gln181Ter | ||||||
| T24C12.2.1:c.541C>T | |||||||
| HGVSg | CHROMOSOME_X:g.2193651C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | T24C12 | |||
| Flanking_sequences | gtttctcgatctttggttgaacttatggct | agtcggatcgtattcgaccggtgctcagtt | |||||
| Mapping_target | T24C12 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00002916 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | SD | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00001515 | |||||
| Transcript | T24C12.2.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | T24C12.2.1:c.541C>T | ||||||
| HGVSp | CE05002:p.Gln181Ter | ||||||
| cDNA_position | 541 | ||||||
| CDS_position | 541 | ||||||
| Protein_position | 181 | ||||||
| Exon_number | 3/10 | ||||||
| Codon_change | Cag/Tag | ||||||
| Amino_acid_change | Q/* | ||||||
| Genetics | Interpolated_map_position | X | -16.8871 | ||||
| Reference | WBPaper00002916 | ||||||
| Method | Substitution_allele |
