WormBase Tree Display for Variation: WBVar00145297

WBVar00145297 Evidence: Paper_evidence: WBPaper00005923
  Name: Public_name: ez12
    Other_name: CE11046:p.Arg431Ter
      F54C1.3b.1:c.1234C>T
      F54C1.3a.2:c.1291C>T
      F54C1.3a.1:c.1291C>T
      CE53747:p.Arg412Ter
    HGVSg: CHROMOSOME_I:g.5000307C>T
  Sequence_details: SMap: S_parent: Sequence: F54C1
    Flanking_sequences: ctatgcggaagacgtaagagacatttgacc gactcacttcaagatggccgtgtttttcag
    Mapping_target: F54C1
    Type_of_mutation: Substitution: c t Paper_evidence: WBPaper00005923
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: DZ
    Status: Live
  Affects: Gene: WBGene00003221
    Transcript: F54C1.3a.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F54C1.3a.1:c.1291C>T
        HGVSp: CE11046:p.Arg431Ter
        cDNA_position: 1296
        CDS_position: 1291
        Protein_position: 431
        Exon_number: 11/17
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
      F54C1.3b.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F54C1.3b.1:c.1234C>T
        HGVSp: CE53747:p.Arg412Ter
        cDNA_position: 1243
        CDS_position: 1234
        Protein_position: 412
        Exon_number: 10/16
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
      F54C1.3a.2 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F54C1.3a.2:c.1291C>T
        HGVSp: CE11046:p.Arg431Ter
        cDNA_position: 1296
        CDS_position: 1291
        Protein_position: 431
        Exon_number: 11/18
        Codon_change: Cga/Tga
        Amino_acid_change: R/*
  Genetics: Interpolated_map_position: I -0.428809
  Reference: WBPaper00005923
  Method: Substitution_allele