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WormBase Tree Display for Variation: WBVar00144828

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Name Class

WBVar00144828EvidencePaper_evidenceWBPaper00014314
NamePublic_namee2429
Other_nameF14F3.1a.1:c.233+1G>A
F14F3.1a.2:c.233+1G>A
HGVSgCHROMOSOME_X:g.10511055G>A
Sequence_detailsSMapS_parentSequenceF14F3
Flanking_sequencesaccacgagcaattggtggctcaaaaccaagtctgtgtatatacattttttattcagcaat
Mapping_targetF14F3
Type_of_mutationSubstitutiongaPaper_evidenceWBPaper00024640
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryCB
StatusLive
AffectsGeneWBGene00006870
TranscriptF14F3.1a.1VEP_consequencesplice_donor_variant
VEP_impactHIGH
HGVScF14F3.1a.1:c.233+1G>A
Intron_number5/13
F14F3.1a.2VEP_consequencesplice_donor_variant
VEP_impactHIGH
HGVScF14F3.1a.2:c.233+1G>A
Intron_number4/12
GeneticsInterpolated_map_positionX2.22423
ReferenceWBPaper00014314
RemarkThe exon numbering in the paper refers to a combination of all isoforms. Exon 4 corresponds to exon 3 in F14F3.1a.Paper_evidenceWBPaper00024640
MethodSubstitution_allele