WormBase Tree Display for Variation: WBVar00144418
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WBVar00144418 | Evidence | Paper_evidence | WBPaper00002448 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | e1948 | |||||
Other_name | CE16043:p.Gln297Ter | ||||||
F45D3.5.1:c.889C>T | |||||||
HGVSg | CHROMOSOME_V:g.12561779C>T | ||||||
Sequence_details (5) | |||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00008019 | ||||||
Laboratory | CB | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00004759 | |||||
Transcript | F45D3.5.1 | VEP_consequence | stop_gained | ||||
VEP_impact | HIGH | ||||||
HGVSc | F45D3.5.1:c.889C>T | ||||||
HGVSp | CE16043:p.Gln297Ter | ||||||
cDNA_position | 890 | ||||||
CDS_position | 889 | ||||||
Protein_position | 297 | ||||||
Exon_number | 5/8 | ||||||
Codon_change | Cag/Tag | ||||||
Amino_acid_change | Q/* | ||||||
Interactor | WBInteraction000501561 | ||||||
WBInteraction000518888 | |||||||
WBInteraction000518891 | |||||||
WBInteraction000518892 | |||||||
WBInteraction000518893 | |||||||
WBInteraction000518894 | |||||||
WBInteraction000558927 | |||||||
WBInteraction000558928 | |||||||
Genetics | Gene_class | sup | |||||
Interpolated_map_position | V | 4.49828 | |||||
Mapping_data | In_multi_point | 1531 | |||||
1532 | |||||||
2797 | |||||||
2798 | |||||||
Description | Phenotype_not_observed | WBPhenotype:0000006 | Paper_evidence | WBPaper00002448 | |||
Curator_confirmed | WBPerson217 | ||||||
Variation_effect | Probable_null_via_phenotype | Paper_evidence | WBPaper00002448 | ||||
Curator_confirmed | WBPerson217 | ||||||
WBPhenotype:0000050 | Paper_evidence | WBPaper00002448 | |||||
Curator_confirmed | WBPerson217 | ||||||
Variation_effect | Probable_null_via_phenotype | Paper_evidence | WBPaper00002448 | ||||
Curator_confirmed | WBPerson217 | ||||||
WBPhenotype:0000054 | Paper_evidence | WBPaper00002448 | |||||
Curator_confirmed | WBPerson217 | ||||||
Variation_effect | Probable_null_via_phenotype | Paper_evidence | WBPaper00002448 | ||||
Curator_confirmed | WBPerson217 | ||||||
WBPhenotype:0000688 | Paper_evidence | WBPaper00002448 | |||||
Curator_confirmed | WBPerson217 | ||||||
Variation_effect | Probable_null_via_phenotype | Paper_evidence | WBPaper00002448 | ||||
Curator_confirmed | WBPerson217 | ||||||
WBPhenotype:0000886 | Person_evidence | WBPerson261 | |||||
Curator_confirmed | WBPerson712 | ||||||
Remark | no phenotype alone | Person_evidence | WBPerson261 | ||||
Curator_confirmed | WBPerson712 | ||||||
Reference | WBPaper00002448 | ||||||
WBPaper00013889 | |||||||
WBPaper00020988 | |||||||
WBPaper00022249 | |||||||
Method | Substitution_allele |