WormBase Tree Display for Variation: WBVar00143718

WBVar00143718 Name: Public_name: e1066
    Other_name: T07H8.4f.1:c.2950+1G>A
      T07H8.4a.1:c.3517+1G>A
      T07H8.4h.1:c.3514+1G>A
      T07H8.4e.1:c.3358+1G>A
      T07H8.4g.1:c.2308+1G>A
      T07H8.4d.1:c.3481+1G>A
      T07H8.4d.2:c.3481+1G>A
      T07H8.4b.1:c.3505+1G>A
    HGVSg: CHROMOSOME_V:g.6961420G>A
  Sequence_details: SMap: S_parent: Sequence: T07H8
    Flanking_sequences: aattccccaccgacatgcccatgtatggag taaaattcaaataacaattgttccattttc
    Mapping_target: T07H8
    Type_of_mutation: Substitution: g a Paper_evidence: WBPaper00024622
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004236
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00003165
    Transcript: T07H8.4e.1 VEP_consequence: splice_donor_variant
        VEP_impact: HIGH
        HGVSc: T07H8.4e.1:c.3358+1G>A
        Intron_number: 13/27
      T07H8.4b.1 VEP_consequence: splice_donor_variant
        VEP_impact: HIGH
        HGVSc: T07H8.4b.1:c.3505+1G>A
        Intron_number: 15/25
      T07H8.4a.1 VEP_consequence: splice_donor_variant
        VEP_impact: HIGH
        HGVSc: T07H8.4a.1:c.3517+1G>A
        Intron_number: 16/31
      T07H8.4h.1 VEP_consequence: splice_donor_variant
        VEP_impact: HIGH
        HGVSc: T07H8.4h.1:c.3514+1G>A
        Intron_number: 15/29
      T07H8.4d.2 VEP_consequence: splice_donor_variant
        VEP_impact: HIGH
        HGVSc: T07H8.4d.2:c.3481+1G>A
        Intron_number: 16/30
      T07H8.4f.1 VEP_consequence: splice_donor_variant
        VEP_impact: HIGH
        HGVSc: T07H8.4f.1:c.2950+1G>A
        Intron_number: 15/29
      T07H8.4g.1 VEP_consequence: splice_donor_variant
        VEP_impact: HIGH
        HGVSc: T07H8.4g.1:c.2308+1G>A
        Intron_number: 7/21
      T07H8.4d.1 VEP_consequence: splice_donor_variant
        VEP_impact: HIGH
        HGVSc: T07H8.4d.1:c.3481+1G>A
        Intron_number: 16/31
  Genetics: Interpolated_map_position: V 0.482729
    Mapping_data: In_2_point: 127
      In_multi_point: 139
        140
      In_pos_neg_data: 844
        861
        1746
  Description: Phenotype (18)
    Phenotype_not_observed: WBPhenotype:0000054 Paper_evidence: WBPaper00038449
        Curator_confirmed: WBPerson3779
      WBPhenotype:0000478 Paper_evidence: WBPaper00000932
        Curator_confirmed: WBPerson712
      WBPhenotype:0000637 Paper_evidence: WBPaper00000214
        Curator_confirmed: WBPerson712
      WBPhenotype:0000663 Paper_evidence: WBPaper00000932
        Curator_confirmed: WBPerson712
        Remark: Animals respond normally to high concentrations of NaCl. Paper_evidence: WBPaper00000932
            Curator_confirmed: WBPerson712
      WBPhenotype:0001084 Paper_evidence: WBPaper00000932
        Curator_confirmed: WBPerson712
        Remark: Animals respond normally to a dilute NaCl gradient. Paper_evidence: WBPaper00000932
            Curator_confirmed: WBPerson712
      WBPhenotype:0001530 Paper_evidence: WBPaper00000932
        Curator_confirmed: WBPerson712
        Remark: FITC does not stain CEP. Paper_evidence: WBPaper00000932
            Curator_confirmed: WBPerson712
      WBPhenotype:0001532 Paper_evidence: WBPaper00000502
        Curator_confirmed: WBPerson712
      WBPhenotype:0001535 Paper_evidence: WBPaper00000932
        Curator_confirmed: WBPerson712
        Remark: FITC does not stain ADE or PDE. Paper_evidence: WBPaper00000932
            Curator_confirmed: WBPerson712
      WBPhenotype:0001660 Paper_evidence: WBPaper00006052
        Curator_confirmed: WBPerson2021
        Remark: No disruption of ASE asymmetry (as seen with lim-6 reporters) Paper_evidence: WBPaper00006052
            Curator_confirmed: WBPerson2021
        Variation_effect: Probable_null_via_phenotype: Paper_evidence: WBPaper00006052
            Curator_confirmed: WBPerson2021
        Phenotype_assay: Genotype: otIs114, otIs6 Paper_evidence: WBPaper00006052
              Curator_confirmed: WBPerson2021
      WBPhenotype:0004004 Paper_evidence: WBPaper00000214
        Curator_confirmed: WBPerson712
        Remark: Males exhibit continued tactile sexual behavior. Paper_evidence: WBPaper00000214
            Curator_confirmed: WBPerson712
  Reference: WBPaper00038449
    WBPaper00031671
    WBPaper00000932
    WBPaper00006052
    WBPaper00000214
    WBPaper00000502
    WBPaper00055368
  Method: Substitution_allele