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WormBase Tree Display for Variation: WBVar00143686

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Name Class

WBVar00143686NamePublic_namee1022
Other_nameF14F3.1b.1:c.146-1G>A
F14F3.1c.1:c.227-1G>A
F14F3.1a.2:c.704-1G>A
F14F3.1a.1:c.704-1G>A
HGVSgCHROMOSOME_X:g.10516559G>A
Sequence_detailsSMapS_parentSequenceF14F3
Flanking_sequencesctcattattatattaaaatgtttactttcaaatttgaaaggactcattatccagatgttt
Mapping_targetF14F3
Type_of_mutationSubstitutiongaPaper_evidenceWBPaper00024640
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryCB
StatusLive
AffectsGeneWBGene00006870
TranscriptF14F3.1c.1VEP_consequencesplice_acceptor_variant
VEP_impactHIGH
HGVScF14F3.1c.1:c.227-1G>A
Intron_number3/7
F14F3.1a.1VEP_consequencesplice_acceptor_variant
VEP_impactHIGH
HGVScF14F3.1a.1:c.704-1G>A
Intron_number9/13
F14F3.1a.2VEP_consequencesplice_acceptor_variant
VEP_impactHIGH
HGVScF14F3.1a.2:c.704-1G>A
Intron_number8/12
F14F3.1b.1VEP_consequencesplice_acceptor_variant
VEP_impactHIGH
HGVScF14F3.1b.1:c.146-1G>A
Intron_number2/5
IsolationMutagenEMSPaper_evidenceWBPaper00024640
GeneticsInterpolated_map_positionX2.22447
RemarkThe exon numbering in the paper refers to a combination of all isoforms. Exon 11 corresponds to exon 8 in F14F3.1a and exon 3 in F14F3.1b and F14F3.1c.Paper_evidenceWBPaper00024640
MethodSubstitution_allele