WormBase Tree Display for Variation: WBVar00143616

WBVar00143616 Evidence: Paper_evidence: WBPaper00003027
  Name: Public_name: e936
    Other_name: F55C7.7i.1:c.4191+1G>T
      F55C7.7b.1:c.4191+1G>T
      F55C7.7i.2:c.4191+1G>T
      F55C7.7a.1:c.4191+1G>T
    HGVSg: CHROMOSOME_I:g.4021953C>A
  Sequence_details: SMap: S_parent: Sequence: F55C7
    Flanking_sequences: ttacaactgtttggatttgaaggatttcaag tagggcttggactttcaattaggtataatta
    Mapping_target: F55C7
    Type_of_mutation: Substitution: g t Paper_evidence: WBPaper00003027
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000214
      WBStrain00004218
      WBStrain00004368
      WBStrain00023447
      WBStrain00055586
      WBStrain00055587
      WBStrain00055589
      WBStrain00055590
      WBStrain00055591
      WBStrain00055593
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00006805
    Transcript: F55C7.7i.1 VEP_consequence: splice_donor_variant
        VEP_impact: HIGH
        HGVSc: F55C7.7i.1:c.4191+1G>T
        Intron_number: 16/25
      F55C7.7b.1 VEP_consequence: splice_donor_variant
        VEP_impact: HIGH
        HGVSc: F55C7.7b.1:c.4191+1G>T
        Intron_number: 16/20
      F55C7.7a.1 VEP_consequence: splice_donor_variant
        VEP_impact: HIGH
        HGVSc: F55C7.7a.1:c.4191+1G>T
        Intron_number: 17/33
      F55C7.7i.2 VEP_consequence: splice_donor_variant
        VEP_impact: HIGH
        HGVSc: F55C7.7i.2:c.4191+1G>T
        Intron_number: 16/24
    Interactor (13)
  Isolation: Mutagen: 32P
  Genetics: Interpolated_map_position: I -1.85907
    Mapping_data: In_2_point: 6
        3200
      In_multi_point: 20
        966
        967
        1219
        1682
        1683
        1759
        1761
        1763
      In_pos_neg_data (17)
  Description: Phenotype (29)
    Phenotype_not_observed: WBPhenotype:0000241 Paper_evidence: WBPaper00004897
        Curator_confirmed: WBPerson2021
        Remark: No accumulation of dead cell corpses Paper_evidence: WBPaper00004897
            Curator_confirmed: WBPerson2021
      WBPhenotype:0001413 Paper_evidence: WBPaper00040813
        Curator_confirmed: WBPerson2706
      WBPhenotype:0001426 Paper_evidence: WBPaper00004883
        Curator_confirmed: WBPerson712
        Variation_effect: Hypomorph_reduction_of_function: Paper_evidence: WBPaper00004883
            Curator_confirmed: WBPerson712
        Phenotype_assay: Genotype: arIs37 Paper_evidence: WBPaper00004883
              Curator_confirmed: WBPerson712
      WBPhenotype:0001652 Paper_evidence: WBPaper00032446
        Curator_confirmed: WBPerson2021
  Disease_info: Models_disease: DOID:1826
    Models_disease_in_annotation: WBDOannot00000553
  Reference (35)
  Method: Substitution_allele