WormBase Tree Display for Variation: WBVar00143314
expand all nodes | collapse all nodes | view schema
| WBVar00143314 | Evidence | Paper_evidence | WBPaper00028438 | |||||
|---|---|---|---|---|---|---|---|---|
| Name | Public_name | e580 | ||||||
| Sequence_details | Mapping_target | K03E6 | ||||||
| Type_of_mutation | Substitution | |||||||
| SeqStatus | Pending_curation | |||||||
| Variation_type | Allele | |||||||
| Origin | Species | Caenorhabditis elegans | ||||||
| Strain | WBStrain00027058 | |||||||
| Laboratory | CB | |||||||
| Status | Live | |||||||
| Affects | Gene | WBGene00006741 | ||||||
| Interactor | WBInteraction000052184 | |||||||
| Genetics | Mapping_data | In_2_point | 4453 | |||||
| Description | Phenotype | WBPhenotype:0001610 | Paper_evidence | WBPaper00028438 | ||||
| Curator_confirmed | WBPerson2987 | |||||||
| Remark | Table 1 | Paper_evidence | WBPaper00028438 | |||||
| Curator_confirmed | WBPerson2987 | |||||||
| Affected_by | Molecule | WBMol:00007859 | Paper_evidence | WBPaper00028438 | ||||
| Curator_confirmed | WBPerson2987 | |||||||
| Phenotype_not_observed | WBPhenotype:0000523 | Paper_evidence | WBPaper00028438 | |||||
| Curator_confirmed | WBPerson2987 | |||||||
| Remark | Table 1 | Paper_evidence | WBPaper00028438 | |||||
| Curator_confirmed | WBPerson2987 | |||||||
| Affected_by | Molecule | WBMol:00001705 | Paper_evidence | WBPaper00028438 | ||||
| Curator_confirmed | WBPerson2987 | |||||||
| WBMol:00004563 | Paper_evidence | WBPaper00028438 | ||||||
| Curator_confirmed | WBPerson2987 | |||||||
| WBPhenotype:0001612 | Paper_evidence | WBPaper00002358 | ||||||
| Curator_confirmed | WBPerson712 | |||||||
| Remark | Animals have a similar EC50 (1030 20 mM) compared to N2 (1050 25 mM). | Paper_evidence | WBPaper00002358 | |||||
| Curator_confirmed | WBPerson712 | |||||||
| Phenotype_assay | Treatment | 50 animals were scored for mobility for 10 sec. at each concentration of ethanol after 5 min exposure. EC50's (concentration at which 50% of the animals were immobile for >10 sec) were determined from a dose response curve over a minimum of 12 concentrations (mM). Immobility was used an as endpoint. Upon removal from ethanol, immobility was reversible within 10-15 min. Treatment and scoring of anesthetic responses are described in Sedensky and Meneely, 1987; Morgan et al. , 1990; Morgan and Sedensky, 1994. | Paper_evidence | WBPaper00002358 | ||||
| Curator_confirmed | WBPerson712 | |||||||
| Temperature | 22-24C | Paper_evidence | WBPaper00002358 | |||||
| Curator_confirmed | WBPerson712 | |||||||
| Reference | WBPaper00015366 | |||||||
| WBPaper00022645 | ||||||||
| WBPaper00015173 | ||||||||
| WBPaper00022026 | ||||||||
| WBPaper00002358 | ||||||||
| WBPaper00018537 | ||||||||
| WBPaper00028438 | ||||||||
| WBPaper00065317 | ||||||||
| Method | Substitution_allele |
