WormBase Tree Display for Variation: WBVar00143184
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| WBVar00143184 | Evidence | Paper_evidence | WBPaper00029002 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | e405 | |||||
| Other_name | C39E6.1.1:c.805C>T | ||||||
| CE35426:p.Arg269Ter | |||||||
| HGVSg | CHROMOSOME_X:g.4747143G>A | ||||||
| Sequence_details | SMap | S_parent | Sequence | C39E6 | |||
| Flanking_sequences | tcaatggaaaaatgctttgggaaattttct | gagagtgggcagccaaattgcatctgatga | |||||
| Mapping_target | C39E6 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00029002 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | CB | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00003056 | |||||
| Transcript | C39E6.1.1 | VEP_consequence | stop_gained | ||||
| VEP_impact | HIGH | ||||||
| HGVSc | C39E6.1.1:c.805C>T | ||||||
| HGVSp | CE35426:p.Arg269Ter | ||||||
| cDNA_position | 806 | ||||||
| CDS_position | 805 | ||||||
| Protein_position | 269 | ||||||
| Exon_number | 7/13 | ||||||
| Codon_change | Cga/Tga | ||||||
| Amino_acid_change | R/* | ||||||
| Genetics | Interpolated_map_position | X | -6.73677 | ||||
| Description | Phenotype | WBPhenotype:0000022 | Paper_evidence | WBPaper00029002 | |||
| Curator_confirmed | WBPerson557 | ||||||
| Reference | WBPaper00022233 | ||||||
| WBPaper00029002 | |||||||
| Method | Substitution_allele |
