WormBase Tree Display for Variation: WBVar00142954

WBVar00142954 Evidence: Paper_evidence: WBPaper00044340
  Name: Public_name: e91
    Other_name: Y57A10A.11.1:c.238C>T
      CE22614:p.Arg80Cys
    HGVSg: CHROMOSOME_II:g.12173668C>T
  Sequence_details: SMap: S_parent: Sequence: Y57A10A
    Flanking_sequences: tcatttacacgtggattcaaccgtaccgcc gtcaagctggctacgagtactcgaatgatg
    Mapping_target: Y57A10A
    Type_of_mutation: Substitution: c t Paper_evidence: WBPaper00044340
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004096
      WBStrain00004369
      WBStrain00004791
      WBStrain00006386
      WBStrain00006392
      WBStrain00006394
      WBStrain00006396
      WBStrain00006398
      WBStrain00007272
      WBStrain00022473
      WBStrain00026939
      WBStrain00027609
      WBStrain00033321
      WBStrain00034229
      WBStrain00034602
      WBStrain00034604
      WBStrain00047822
      WBStrain00047823
      WBStrain00047824
      WBStrain00049519
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00004394
    Transcript: Y57A10A.11.1 (12)
    Interactor: WBInteraction000052484
      WBInteraction000052497
      WBInteraction000052504
      WBInteraction000052505
      WBInteraction000052506
      WBInteraction000052507
      WBInteraction000052508
      WBInteraction000052509
  Genetics: Interpolated_map_position: II 6.89249
    Mapping_data: In_2_point: 39
        44
        271
        1535
        6102
        6154
      In_multi_point (22)
      In_pos_neg_data: 1542
        1553
        2141
    Marked_rearrangement: mIn1[rol-1(e91) dpy-10(e128)]
      mIn1[rol-1(e91)]
  Description: Phenotype: WBPhenotype:0000501 Paper_evidence: WBPaper00000465
          WBPaper00000906
          WBPaper00001396
        Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
          WBPerson469
        Remark: adults left-handed rollers Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
          Only animals expressing adult cuticle will roll; thus, lin-29 rol-1 will not roll. Paper_evidence: WBPaper00001396
            Curator_confirmed: WBPerson469
        Recessive (2)
        EQ_annotations: Life_stage: WBls:0000041 PATO:0000460 Paper_evidence: WBPaper00000465
                Person_evidence: WBPerson261
                Curator_confirmed: WBPerson712
        Phenotype_assay: Temperature: 16C, 25C Paper_evidence: WBPaper00000465
              Curator_confirmed: WBPerson712
        Ease_of_scoring: ES3_Easy_to_score: Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
      WBPhenotype:0000583 Paper_evidence: WBPaper00000465
        Curator_confirmed: WBPerson712
        Remark: Weak Dumpy in dauer stage only. Adults not Dpy at any temperature. Paper_evidence: WBPaper00000465
            Curator_confirmed: WBPerson712
        Recessive (2)
        EQ_annotations: Life_stage: WBls:0000032 PATO:0000460 Paper_evidence: WBPaper00000465
                Curator_confirmed: WBPerson712
        Phenotype_assay: Temperature: 25C Paper_evidence: WBPaper00000465
              Curator_confirmed: WBPerson712
      WBPhenotype:0000645 Paper_evidence: WBPaper00000031
        Curator_confirmed: WBPerson48
      WBPhenotype:0001516 Paper_evidence: WBPaper00000465
        Curator_confirmed: WBPerson712
        Remark: Alae make a 1/2 turn along the length of the animal. Paper_evidence: WBPaper00000465
            Curator_confirmed: WBPerson712
        Recessive (2)
        EQ_annotations: Life_stage: WBls:0000041 PATO:0000460 Paper_evidence: WBPaper00000465
                Curator_confirmed: WBPerson712
        Phenotype_assay: Temperature: 25C Paper_evidence: WBPaper00000465
              Curator_confirmed: WBPerson712
    Phenotype_not_observed: WBPhenotype:0000505 Paper_evidence: WBPaper00001328
        Curator_confirmed: WBPerson712
        Remark: Males are not Ram. Paper_evidence: WBPaper00001328
            Curator_confirmed: WBPerson712
        EQ_annotations: Anatomy_term: WBbt:0006941 PATO:0000460 Paper_evidence: WBPaper00001328
                Curator_confirmed: WBPerson712
          Life_stage: WBls:0000056 PATO:0000460 Paper_evidence: WBPaper00001328
                Curator_confirmed: WBPerson712
        Phenotype_assay: Temperature: 20C Paper_evidence: WBPaper00001328
              Curator_confirmed: WBPerson712
          Genotype: him-5(e1490) Paper_evidence: WBPaper00001328
              Curator_confirmed: WBPerson712
      WBPhenotype:0001412 Paper_evidence: WBPaper00000465
        Curator_confirmed: WBPerson712
        EQ_annotations: Life_stage: WBls:0000041 PATO:0000460 Paper_evidence: WBPaper00000465
                Curator_confirmed: WBPerson712
        Phenotype_assay: Temperature: 25C Paper_evidence: WBPaper00000465
              Curator_confirmed: WBPerson712
      WBPhenotype:0001515 Paper_evidence: WBPaper00000465
        Curator_confirmed: WBPerson712
        EQ_annotations: Life_stage: WBls:0000041 PATO:0000460 Paper_evidence: WBPaper00000465
                Curator_confirmed: WBPerson712
        Phenotype_assay: Temperature: 25C Paper_evidence: WBPaper00000465
              Curator_confirmed: WBPerson712
      WBPhenotype:0001517 Paper_evidence: WBPaper00000465
        Curator_confirmed: WBPerson712
        EQ_annotations: Life_stage: WBls:0000041 PATO:0000460 Paper_evidence: WBPaper00000465
                Curator_confirmed: WBPerson712
        Phenotype_assay: Temperature: 25C Paper_evidence: WBPaper00000465
              Curator_confirmed: WBPerson712
  Reference (15)
  Remark: Variation stub/paper connection generated from the May 2021 NN VFP dataset.
    Created by WBPerson51134 from the NN_VFP_triage_pipeline
  Method: Substitution_allele