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WormBase Tree Display for Variation: WBVar00130455

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Name Class

WBVar00130455EvidencePaper_evidenceWBPaper00030778
WBPaper00055507
NamePublic_nameWBVar00130455
Other_namecbs65976
cb65976Paper_evidenceWBPaper00055507
HGVSgchrIV:g.4352286T>A
Sequence_detailsSMapS_parentSequencecb25.fpc4260b
Flanking_sequencesaagaaatggagaaccatttttttccttttggttcgagaagaatagaatgt
Mapping_targetcb25.fpc4260b
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digestCTRYAGBfmI, BstSFI, SfcI, SfeI651 302 47
Polymorphic_strain_digestCTRYAGBfmI, BstSFI, SfcI, SfeI953 47
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
AffectsGeneWBGene00040471
TranscriptCBG21779a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScCBG21779a.1:c.357+6142A>T
Intron_number3/9
ReferenceWBPaper00030778
WBPaper00055507
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 2 sequencing read(s)
MethodSNP