WormBase Tree Display for Variation: WBVar00130455
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WBVar00130455 | Evidence | Paper_evidence | WBPaper00030778 | |||
---|---|---|---|---|---|---|
WBPaper00055507 | ||||||
Name | Public_name | WBVar00130455 | ||||
Other_name | cbs65976 | |||||
cb65976 | Paper_evidence | WBPaper00055507 | ||||
HGVSg | chrIV:g.4352286T>A | |||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc4260b | ||
Flanking_sequences | aagaaatggagaaccatttttttcc | ttttggttcgagaagaatagaatgt | ||||
Mapping_target | cb25.fpc4260b | |||||
Type_of_mutation | Substitution | T | A | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
RFLP | Reference_strain_digest | CTRYAG | BfmI, BstSFI, SfcI, SfeI | 651 302 47 | ||
Polymorphic_strain_digest | CTRYAG | BfmI, BstSFI, SfcI, SfeI | 953 47 | |||
Natural_variant | ||||||
Origin | Species | Caenorhabditis briggsae | ||||
Strain | WBStrain00041077 | |||||
Laboratory | CP | |||||
Person | WBPerson3706 | |||||
WBPerson227 | ||||||
WBPerson225 | ||||||
Status | Live | |||||
Affects | Gene | WBGene00040471 | ||||
Transcript | CBG21779a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | CBG21779a.1:c.357+6142A>T | |||||
Intron_number | 3/9 | |||||
Reference | WBPaper00030778 | |||||
WBPaper00055507 | ||||||
Remark | Predicted by: ssaha-SNP v2.0 | |||||
This SNP was observed in 2 sequencing read(s) | ||||||
Method | SNP |